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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901373.1_cds_XP_016451386.1_45744
CDS Infomation

[gene=LOC107776081] [db_xref=GeneID:107776081] [protein=LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X2] [protein_id=XP_016451386.1] [location=complement(join(122892..123826,123919..124179,124270..124305,129970..130771))] [gbkey=CDS]
Sequence

ATGTTTCAGAATCAATCTCACTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTCTCTT
CTTTTTCTTTCTCTGTTTTTCTCCTCAGTTAAATCCAGTGCAAATGATGACGCTCCGTCT
TATGCATATTGTCCTAAACATAACTGCAGTGGAGTTGAAGTTTCATATCCTTTCTGGAGG
CTTGACAATTACAACGCAACCGCTCCTCAGTACTGTGGTTACCCTGGATTTGGCATCAGC
TGCTCTATTTCTCATTCTCAACCATATCCTATTCTTCACCTTCCGGGTGATGCTTTCTAC
GTTAAAAATATAGATTATGAAACCAATTCCCTCACTCTAGTGGACATTGATGTTTTCGAC
GTGCCATGTCCCAGAGCACGTCACAATCTTACTTTAGAACACTTGCCTTTGGATTATTCG
GATTCCGATCTGAAACTTACATTTTATTTCAATTGTACAAAATCTCTACCTCAAGCTTAT
CCCGCGGAGTGCTTAATAAAATCAGGTGGAAAAGCATCTTATTTCTATGTTGGGGAAATC
AGTGAGCCGGAAGATTTGAACTGGATTGGGATTTGTGAGGAGAAAGTGGTGGCGACGGTG
ACGGAGAGGGGAAGCTTCCAGAACAATGATTGGATCGGAGGATTTGGTGGGGCCATGGGC
GAGGGTTTCGTGCTGGACTGGCGGAGCGCGTCGGAGTGCGGCAAGTGTGAGGACTCACAC
GGGCGGTGTGGTTTCAACAATTCAACCCAGAATCTCTTGTGCTTTTGCAAAGATGGTACC
GTTAAGTTTGATCATTGCAAAGGCAATAAAAGAGATATCAGAGTGAAGGCTGCCGTAGGT
GTAAGTGCAGCTGCATTAACTGCCTTTGTGGCATGTGTATTTTTCTTTCTCTATCGTCGT
CGACAGAAGAAAAGTGACGCCGGTTCGTCTTTGATCTCCAGTAGCATCCTTTCTTATCCC
TCCTCAATAGCGGATCCTGAAAAGGCTTCACACTATTTCGGAATTCCCGTATTTGACTAC
AATGAACTGCAAGAAGCCACAAGCAATTTTGATTCCAACAAAGAACTTGGAGAAGGTGGC
TTTGGCACAGTATACAAAGGTAAACTTCGAGATGGACGTGTTGTTGCCGTAAAACGTTTA
TATGAGAACAACTACAAGAGGGTTGAGCAATTCCGTAATGAAGTCAAACTCCTCACACGC
TTGCACCATCGAAATCTAGTTACCCTTTATGGATGCACATCTCGCCATAGCCGCGAGCTT
CTTCTTGTGTATGAATATATTCCCAATGGCACAGTTGCTGATCATCTTCATGGAGAACAC
ACTAAGCCTGGATCGCTTTCATGGAATACACGAATGAGCATTGCCGTAGAAACGGCAAGT
GCACTAACCTATCTCCACAATTCAGATGTCATTCACAGAGATGTAAAAACTAACAATATC
CTCCTAGACAATAATTTCTGCGTCAAAGTAGCAGATTTTGGCTTGTCTCGGCTTTTCCCA
ACTGATGCTACTCACGTCTCAACAGCTCCACAGGGTACCCCTGGATATGTTGATCCCCAG
TATCACGAATGCTATCAACTCACCAGCAAAAGTGATGTGTATAGTTTCGGGGTGGTACTA
ATCGAGCTTATATCCTCCCTACCAGCTGTTGATATCTCTAGGCATCGATATGAAATAAAT
CTGTCAAATATGGCAATTAACAAGATTCAGAGCAATGCATTACATGAGTTGGCTGATCCA
AGTCTTGGTTTTGATTCCAATGAGAAGGTAAAGTGGATGATCACCGCCGTGGCAGAGTTG
GCTTTCCAGTGTTTACAGAATGACAGGGATTTGAGACCATCCATGCAAGAGGTTTTGAAG
TCTCTACTGGGAATTCAGAGTATGGACAAAGCTGCAGGAGAAACAAAGAAAGCAAGTCCT
GGTGATGATTCTGGGCTGTTGAAGAATAACGCTTTATCTCTCTCACCCGATTCAGTTATT
GCAAAATGGACTAGCAGTAGCAGGTCAACAACATCTACTTCTAGTACTGGCTAA

Peptide Sequence

PEP ID

XP_016451386.1
PEP Infomation

PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X2 [Nicotiana tabacum]
Sequence

MFQNQSHSFFFFFFFFFLSLLFLSLFFSSVKSSANDDAPSYAYCPKHNCSGVEVSYPFWR
LDNYNATAPQYCGYPGFGISCSISHSQPYPILHLPGDAFYVKNIDYETNSLTLVDIDVFD
VPCPRARHNLTLEHLPLDYSDSDLKLTFYFNCTKSLPQAYPAECLIKSGGKASYFYVGEI
SEPEDLNWIGICEEKVVATVTERGSFQNNDWIGGFGGAMGEGFVLDWRSASECGKCEDSH
GRCGFNNSTQNLLCFCKDGTVKFDHCKGNKRDIRVKAAVGVSAAALTAFVACVFFFLYRR
RQKKSDAGSSLISSSILSYPSSIADPEKASHYFGIPVFDYNELQEATSNFDSNKELGEGG
FGTVYKGKLRDGRVVAVKRLYENNYKRVEQFRNEVKLLTRLHHRNLVTLYGCTSRHSREL
LLVYEYIPNGTVADHLHGEHTKPGSLSWNTRMSIAVETASALTYLHNSDVIHRDVKTNNI
LLDNNFCVKVADFGLSRLFPTDATHVSTAPQGTPGYVDPQYHECYQLTSKSDVYSFGVVL
IELISSLPAVDISRHRYEINLSNMAINKIQSNALHELADPSLGFDSNEKVKWMITAVAEL
AFQCLQNDRDLRPSMQEVLKSLLGIQSMDKAAGETKKASPGDDSGLLKNNALSLSPDSVI
AKWTSSSRSTTSTSSTG

Transcript Sequence

Gene sequence data has not been registered.